Utku Erdoğdu

Publications

Journal Articles

  • Integrating Machine Learning Techniques into Robust Data Enrichment Approach and Its Application to Gene Expression Data
    Utku Erdoğdu, Mehmet Tan, Reda Alhajj, Faruk Polat, Jon Rokne, and Douglas Demetrick
    International Journal of Data Mining and Bioinformatics, In press

Conference Articles

  • Dynamic cooperation using resource based planning
    Utku Erdoğdu and Faruk Polat
    Fifth International Joint Conference on Autonomous Agents and Multiagent Systems AAMAS 2006,
    Hakodate, Japan, pp. 329-331, 8-12 May 2006
    [pdf]
  • The Benefit of Decomposing POMDP for Control of Gene Regulatory Networks
    Utku Erdoğdu, Reda Alhajj, and Faruk Polat
    2011 IEEE/WIC/ACM International Conference on Web Intelligence and Intelligent Agent Technology WI-IAT 2011,
    Lyon, France, pp. 381-385, 22-27 August 2011
    [pdf] - [presentation]
  • Employing Machine Learning Techniques for Data Enrichment: Increasing the Number of Samples for Effective Gene Expression Data Analysis
    Utku Erdoğdu, Mehmet Tan, Reda Alhajj, Faruk Polat, Douglas Demetrick, and Jon Rokne
    2011 IEEE International Conference on Bioinformatics and Biomedicine BIBM 2011,
    Atlanta, GA, USA, pp. 238-242, 12-15 November 2011
    [pdf]
  • Partially Observable Gene Regulatory Network Control Without a Boundary on Horizon
    Utku Erdoğdu, Faruk Polat, and Reda Alhajj
    24th IEEE International Conference on Tools with Artificial Intelligence ICTAI 2012,
    Athens, Greece, 7-9 November 2012, To appear
  • Effective Enrichment of Gene Expression Data Sets
    Utku Şirin, Utku Erdoğdu, Faruk Polat, Mehmet Tan, and Reda Alhajj
    Eleventh International Conference on Machine Learning and Applications ICMLA 2012,
    Boca Raton, Florida, USA, 12-15 December 2012, To appear

Ph.D. Thesis

Efficient Partially Observable Markov Decision Process Based Formulation of Gene Regulatory Network Control Problem
Middle East Technical University, April 2012
Supervisor: Prof. Faruk Polat (METU)
Co-Supervisor: Prof. Reda Alhajj (University of Calgary)
[pdf]

M.Sc. Thesis

Resource Based Plan Cooperation in Dynamic Multi-Agent Systems
Middle East Technical University, January 2004
Supervisor: Prof. Faruk Polat (METU)